Skyscanner

Cheap flights from Mykonos to Naxos

Travelers and cabin class

Compare Mykonos to Naxos flight deals

Find the cheapest month or even day of the year to fly to Naxos

Book the best Naxos fare with no extra fees

Flight deals from Mykonos to Naxos

Looking for a cheap last-minute deal or the best round-trip flight from Mykonos to Naxos? Find the lowest prices on one-way and round-trip tickets right here.
Naxos.C$283 per passenger.Departing Fri, Oct 10, returning Fri, Oct 10.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Mykonos on Fri, Oct 10, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Fri, Oct 10, arriving in Mykonos.Price includes taxes and charges.From C$283, select.
Naxos.C$339 per passenger.Departing Tue, Jun 3, returning Sat, Jun 7.Round-trip flight with Aegean Airlines and SKY express.Outbound indirect flight with Aegean Airlines, departing from Mykonos on Tue, Jun 3, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sat, Jun 7, arriving in Mykonos.Price includes taxes and charges.From C$339, select.
Naxos.C$385 per passenger.Departing Sat, Sep 20, returning Fri, Oct 10.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Mykonos on Sat, Sep 20, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Fri, Oct 10, arriving in Mykonos.Price includes taxes and charges.From C$385, select.
Naxos.C$423 per passenger.Departing Sat, May 31, returning Wed, Jun 4.Round-trip flight with SKY express and Aegean Airlines.Outbound indirect flight with SKY express, departing from Mykonos on Sat, May 31, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departing from Naxos on Wed, Jun 4, arriving in Mykonos.Price includes taxes and charges.From C$423, select.
Naxos.C$463 per passenger.Departing Mon, Jun 30, returning Thu, Jul 17.Round-trip flight with Aegean Airlines and SKY express.Outbound indirect flight with Aegean Airlines, departing from Mykonos on Mon, Jun 30, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Thu, Jul 17, arriving in Mykonos.Price includes taxes and charges.From C$463, select.
Naxos.C$517 per passenger.Departing Sat, Jul 26, returning Thu, Jul 31.Round-trip flight with Aegean Airlines and SKY express.Outbound indirect flight with Aegean Airlines, departing from Mykonos on Sat, Jul 26, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Thu, Jul 31, arriving in Mykonos.Price includes taxes and charges.From C$517, select.
Naxos.C$565 per passenger.Departing Sat, May 17, returning Sat, May 24.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Mykonos on Sat, May 17, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sat, May 24, arriving in Mykonos.Price includes taxes and charges.From C$565, select.
Naxos.C$634 per passenger.Departing Wed, Aug 6, returning Sat, Aug 9.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Mykonos on Wed, Aug 6, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sat, Aug 9, arriving in Mykonos.Price includes taxes and charges.From C$634, select.

Find the cheapest month to fly from Mykonos to Naxos

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Mykonos to Naxos flights are currently cheapest in October.
May
from C$565
Jun
from C$339
Jul
from C$517
Aug
from C$634
Sep
Find prices
Oct
from C$283
Nov
Find prices
Dec
Find prices
Jan
Find prices
Feb
Find prices
Mar
Find prices
Apr
Find prices

Mykonos to Naxos: Alternative routes

Compare routes from Mykonos to Naxos below. You may find an airport to fly into that's cheaper, faster, or easier than Naxos.

Mykonos to Naxos: Flight information

The things to know before you go.
Cheapest flight foundC$283
Cheapest month to flyOctober

Finding cheap flights from Mykonos to Naxos: Frequently asked questions

The best price we found for a round-trip flight from Mykonos to Naxos is C$283. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
Currently, there are no airlines that fly direct from Mykonos to Naxos. But we found flights with one or more stops from C$283.
There are no flights flying from Mykonos to Naxos, as of May 2025.
The cheapest month to fly from Mykonos to Naxos is usually October.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Mykonos Airport to Naxos Airport on Friday, October 10, 2025.
No airlines currently offer direct flights between Mykonos Airport and Naxos Airport. Most routes have one or more stops.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Naxos but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar, and it looks like the cheapest time to book a flight to Naxos is around 40 days in advance, so don’t leave your flight to the last minute.
Currently, SKY express offers the cheapest flight tickets to Naxos.

Flying from Mikonos Airport (JMK) to Naxos Airport (JNX): what you need to know

  • For a smooth journey, turn up at the airport two hours ahead of international flights and an hour before domestic departures. This ensures you have enough time to board your JMK to JNX flight.

  • You'll likely experience longer queues in popular months like August. Arriving up to four hours ahead of international flights and two hours for a domestic departure is a good idea.

  • Explore another city along the way or simply break up your flight with a stopover. Just deselect 'Direct flights only' to see your options when searching for tickets from Mikonos Airport to Naxos Airport. Many travellers pass through Eleftherios Venizelos International Airport on this route.

How to find the cheapest flights from Mikonos Airport (JMK) to Naxos Airport (JNX)

  • C$158 is the best price for a one-way Mikonos Airport to Naxos Airport flight. Return flights start at C$283. These prices can change based on demand.

  • Don't leave things to the last moment. You're more likely to find cheap tickets from JMK to JNX if you book ahead. Airlines often have some amazing early bird rates.

  • Finding cheap flights from Mikonos Airport to Naxos Airport is easier if you can be flexible with your trip dates. Use the 'Whole month' search function to see the best prices across the month and score a great deal.

  • You don't need to check back in every day to see if fares have dropped when you set up a Price Alert. We'll let you know the moment a special offer becomes available on cheap flights from JMK to JNX.

  • Tailor your flights with filters. Choose your ideal departure and arrival times, total journey duration and airlines. You can also sort the results by 'Cheapest,' 'Best' or 'Fastest' flights from Mikonos Airport to Naxos Airport.

Handy information about Mikonos Airport (JMK)

  • Mikonos Airport scores top marks for on-time performance. 90.0% of flights that take off from JMK arrive at their destination as scheduled.

  • Mikonos Airport is about 3 kilometres from central Mykonos. If you're catching a cab, ride-sharing or driving from the centre, it'll take you 10 minutes or so to arrive, depending on the traffic.

  • Taking public transport? Expect a trip time of around 35 minutes.

  • Taking an early flight from Mikonos Airport to Naxos Airport? Avoid rushing to the airport (and catch some extra z's) by choosing one of these stays near JMK:

Arriving at Naxos Airport (JNX)

  • Consider booking a hotel near JNX if you have a late Mikonos Airport to Naxos Airport flight. Check in to one of these accommodation options and skip the long transfer:

  • Pick up a Naxos Airport rental car and explore Naxos and beyond with your own wheels. IDEA MOBILITY, Carwiz and Avance are popular outlets to choose from here.

  • Booking your vehicle from Naxos Airport about one week ahead gives you the best chance of locking in a great deal.

Getting from Naxos Airport (JNX) to central Naxos

  • Naxos Airport to central Naxos has a drive time of about 5 minutes. It's approximately 3 kilometres away.

  • It'll take around 40 minutes to get there using public transport.

When to fly to Naxos Airport (JNX)

  • It's time to plan your trip dates for your flight from Mikonos Airport to Naxos Airport. July is the most popular month to visit Naxos. If you want a more low-key vibe, go in January.

  • Book your flight from Mikonos Airport to Naxos Airport for August if you'd like to explore Naxos during its warmest month. You can expect temperatures of between 23ºC (73ºF) and 28ºC (82ºF).

  • Search for cheap tickets from JMK to JNX in January if you want to travel in cooler conditions. Temperatures are at their lowest then, ranging between 9ºC (48ºF) and 15ºC (59ºF) on average.

Explore more of Greece

  • Naxos has plenty to offer, but there are so many other parts of Greece waiting to be explored. Around 177 kilometres north-west of Naxos, a trip to Athens will keep your itinerary busy. Start with leading attractions like Museum of the Centre for the Acropolis Studies, Acropolis of Athens and The Parthenon.

  • Around 451 kilometres north-west of Naxos, Thessaloniki is another essential stop in Greece. Experience major highlights starting with Arch of Galerius, Aristotelous Square and Museum of Byzantine Culture.

Plan the rest of your trip from Mykonos to Naxos

Prices shown on this page are estimated lowest prices only. Found in the last 45 days.